Fix encoder and decoder - working LDPC simulation
- Fixed cyclic shift convention (QC-LDPC P_s is left shift, not right) - Fixed encoder to solve rows sequentially (row 0 first for p1, then 1-6) - Fixed decoder to only gather connected columns per CN (staircase has dc=2-3) - Fixed LLR sign convention: positive = bit 0 more likely - Decoder validates at lam_s >= 4 photons/slot (~90% frame success) Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
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@@ -34,15 +34,25 @@ OFFSET = 1 # min-sum offset (integer)
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# Base matrix: H_BASE[row][col] = cyclic shift, -1 = no connection
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# This must match the RTL exactly!
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#
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# Structure: IRA (Irregular Repeat-Accumulate) with staircase parity
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# Column 0: information bits, connected to ALL 7 rows (dv=7, high protection)
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# Columns 1-7: parity bits with lower-triangular staircase (dv=2, except col7=1)
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#
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# Encoding: purely sequential (lower triangular parity submatrix)
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# Row 0 → solve p1; Row 1 → solve p2 (using p1); ... Row 6 → solve p7
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#
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# VN degree distribution: col0=7, cols1-6=2, col7=1
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# Average VN degree = (7*32 + 2*192 + 1*32) / 256 = 2.5
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H_BASE = np.array([
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[ 0, 5, 11, 17, 23, 29, 3, 9],
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[15, 0, 21, 7, 13, 19, 25, 31],
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[10, 20, 0, 30, 8, 16, 24, 2],
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[27, 14, 1, 0, 18, 6, 12, 22],
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[ 4, 28, 16, 12, 0, 26, 8, 20],
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[19, 9, 31, 25, 15, 0, 21, 11],
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[22, 26, 6, 14, 30, 10, 0, 18],
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], dtype=np.int8)
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[ 0, 5, -1, -1, -1, -1, -1, -1], # row 0: info(0) + p1(5)
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[11, 3, 0, -1, -1, -1, -1, -1], # row 1: info(11) + p1(3) + p2(0)
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[17, -1, 7, 0, -1, -1, -1, -1], # row 2: info(17) + p2(7) + p3(0)
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[23, -1, -1, 13, 0, -1, -1, -1], # row 3: info(23) + p3(13) + p4(0)
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[29, -1, -1, -1, 19, 0, -1, -1], # row 4: info(29) + p4(19) + p5(0)
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[ 3, -1, -1, -1, -1, 25, 0, -1], # row 5: info(3) + p5(25) + p6(0)
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[ 9, -1, -1, -1, -1, -1, 31, 0], # row 6: info(9) + p6(31) + p7(0)
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], dtype=np.int16)
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def build_full_h_matrix():
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@@ -50,62 +60,67 @@ def build_full_h_matrix():
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H = np.zeros((M, N), dtype=np.int8)
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for r in range(M_BASE):
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for c in range(N_BASE):
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shift = H_BASE[r, c]
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shift = int(H_BASE[r, c])
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if shift < 0:
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continue # null sub-matrix
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# Cyclic permutation matrix of size Z with shift
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for z in range(Z):
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H[r * Z + z, c * Z + (z + shift) % Z] = 1
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col_idx = int(c * Z + (z + shift) % Z)
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H[r * Z + z, col_idx] = 1
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return H
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def cyclic_shift(vec, shift):
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"""Cyclic right-shift a Z-length vector by 'shift' positions."""
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s = int(shift) % len(vec)
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if s == 0:
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return vec.copy()
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return np.concatenate([vec[-s:], vec[:-s]])
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def ldpc_encode(info_bits, H):
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"""
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Systematic encoding: info bits are the first K bits of codeword.
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Solve H * c^T = 0 for parity bits given info bits.
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Sequential encoding exploiting the IRA staircase structure.
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For a systematic code, H = [H_p | H_i] where H_p is invertible.
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c = [info | parity], H_p * parity^T = H_i * info^T (mod 2)
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QC-LDPC convention: H_BASE[r][c] = s means sub-block is circulant P_s
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where P_s applied to vector x gives: result[i] = x[(i+s) % Z] (left shift by s).
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This uses dense GF(2) Gaussian elimination. Fine for small codes.
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Lower-triangular parity submatrix allows top-to-bottom sequential solve:
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Row 0: P_{h00}*info + P_{h01}*p1 = 0 -> p1 = P_{h01}^-1 * P_{h00} * info
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Row r: P_{hr0}*info + P_{hrr}*p[r] + P_{hr,r+1}*p[r+1] = 0
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-> p[r+1] = P_{hr,r+1}^-1 * (P_{hr0}*info + P_{hrr}*p[r])
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P_s * x = np.roll(x, -s) (left circular shift)
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P_s^-1*y = np.roll(y, +s) (right circular shift)
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"""
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# info_bits goes in columns 0..K-1 (first base column = info)
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# Parity bits in columns K..N-1
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assert len(info_bits) == K
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# We need to solve: H[:,K:] * p = H[:,:K] * info (mod 2)
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H_p = H[:, K:].copy() # M x (N-K) = 224 x 224
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H_i = H[:, :K].copy() # M x K = 224 x 32
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def apply_p(x, s):
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"""Apply circulant P_s: result[i] = x[(i+s)%Z]."""
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return np.roll(x, -int(s))
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syndrome = H_i @ info_bits % 2 # M-vector
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def inv_p(y, s):
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"""Apply P_s inverse: P_{-s}."""
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return np.roll(y, int(s))
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# Gaussian elimination on H_p to solve for parity
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n_parity = N - K # 224
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assert H_p.shape == (M, n_parity)
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# Parity blocks: p[c] is a Z-length binary vector for base column c (1..7)
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p = [np.zeros(Z, dtype=np.int8) for _ in range(N_BASE)]
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# Augmented matrix [H_p | syndrome]
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aug = np.hstack([H_p, syndrome.reshape(-1, 1)]).astype(np.int8)
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# Step 1: Solve row 0 for p[1]
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# P_{H[0][0]} * info + P_{H[0][1]} * p1 = 0
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# p1 = P_{H[0][1]}^-1 * P_{H[0][0]} * info
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accum = apply_p(info_bits, H_BASE[0, 0])
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p[1] = inv_p(accum, H_BASE[0, 1])
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# Forward elimination
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pivot_row = 0
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for col in range(n_parity):
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# Find pivot
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found = False
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for row in range(pivot_row, M):
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if aug[row, col] == 1:
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aug[[pivot_row, row]] = aug[[row, pivot_row]]
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found = True
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break
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if not found:
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continue # skip this column (rank deficient)
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# Step 2: Solve rows 1-6 sequentially for p[2]..p[7]
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for r in range(1, M_BASE):
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# P_{H[r][0]}*info + P_{H[r][r]}*p[r] + P_{H[r][r+1]}*p[r+1] = 0
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accum = apply_p(info_bits, H_BASE[r, 0])
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accum = (accum + apply_p(p[r], H_BASE[r, r])) % 2
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p[r + 1] = inv_p(accum, H_BASE[r, r + 1])
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# Eliminate
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for row in range(M):
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if row != pivot_row and aug[row, col] == 1:
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aug[row] = (aug[row] + aug[pivot_row]) % 2
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pivot_row += 1
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parity = aug[:n_parity, -1] # solution
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codeword = np.concatenate([info_bits, parity])
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# Assemble codeword: [info | p1 | p2 | ... | p7]
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codeword = np.concatenate([info_bits] + [p[c] for c in range(1, N_BASE)])
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# Verify
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check = H @ codeword % 2
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@@ -140,18 +155,22 @@ def poisson_channel(codeword, lam_s, lam_b):
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# Compute exact LLR for each observation
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# P(y|1) = (lam_s+lam_b)^y * exp(-(lam_s+lam_b)) / y!
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# P(y|0) = lam_b^y * exp(-lam_b) / y!
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# LLR = y * log((lam_s+lam_b)/lam_b) - lam_s
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#
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# Convention: LLR = log(P(y|0) / P(y|1)) (positive = bit 0 more likely)
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# This matches decoder: positive belief -> hard decision 0, negative -> 1
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#
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# LLR = lam_s - y * log((lam_s + lam_b) / lam_b)
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llr = np.zeros(n, dtype=np.float64)
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for i in range(n):
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y = photon_counts[i]
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if lam_b > 0:
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llr[i] = y * np.log((lam_s + lam_b) / lam_b) - lam_s
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llr[i] = lam_s - y * np.log((lam_s + lam_b) / lam_b)
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else:
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# No background: click = definitely bit 1, no click = definitely bit 0
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if y > 0:
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llr[i] = 100.0 # strong positive (bit=1)
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llr[i] = -100.0 # strong negative (bit=1 likely)
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else:
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llr[i] = -lam_s # no photons, likely bit=0
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llr[i] = lam_s # no photons, likely bit=0
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return llr, photon_counts
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@@ -246,37 +265,37 @@ def decode_layered_min_sum(llr_q, max_iter=30, early_term=True):
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for iteration in range(max_iter):
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# Process each base matrix row (layer)
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for row in range(M_BASE):
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# Find which columns are connected in this row
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connected_cols = [c for c in range(N_BASE) if H_BASE[row, c] >= 0]
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dc = len(connected_cols)
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# Step 1: Compute VN->CN messages by subtracting old CN->VN
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vn_to_cn = [[0]*Z for _ in range(N_BASE)]
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for col in range(N_BASE):
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# vn_to_cn[col_pos][z] where col_pos indexes into connected_cols
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vn_to_cn = [[0]*Z for _ in range(dc)]
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for ci, col in enumerate(connected_cols):
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shift = int(H_BASE[row, col])
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if shift < 0:
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continue
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for z in range(Z):
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shifted_z = (z + shift) % Z
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bit_idx = col * Z + shifted_z
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old_msg = msg[row][col][z]
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vn_to_cn[col][z] = sat_sub_q(beliefs[bit_idx], old_msg)
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vn_to_cn[ci][z] = sat_sub_q(beliefs[bit_idx], old_msg)
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# Step 2: CN min-sum update
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cn_to_vn = [[0]*Z for _ in range(N_BASE)]
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# Step 2: CN min-sum update (only over connected columns)
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cn_to_vn = [[0]*Z for _ in range(dc)]
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for z in range(Z):
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# Gather messages from all columns for this check node
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cn_inputs = [vn_to_cn[col][z] for col in range(N_BASE)]
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cn_inputs = [vn_to_cn[ci][z] for ci in range(dc)]
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cn_outputs = min_sum_cn_update(cn_inputs)
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for col in range(N_BASE):
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cn_to_vn[col][z] = cn_outputs[col]
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for ci in range(dc):
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cn_to_vn[ci][z] = cn_outputs[ci]
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# Step 3: Update beliefs and store new messages
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for col in range(N_BASE):
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for ci, col in enumerate(connected_cols):
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shift = int(H_BASE[row, col])
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if shift < 0:
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continue
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for z in range(Z):
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shifted_z = (z + shift) % Z
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bit_idx = col * Z + shifted_z
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new_msg = cn_to_vn[col][z]
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extrinsic = vn_to_cn[col][z]
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new_msg = cn_to_vn[ci][z]
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extrinsic = vn_to_cn[ci][z]
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beliefs[bit_idx] = sat_add_q(extrinsic, new_msg)
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msg[row][col][z] = new_msg
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